Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Gm19164-201ENSMUST00000210667 640 ntBASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn3bQ8BHK2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Gm10812-201ENSMUST00000099864 546 ntBASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.96□□□□□ -0.17
Scn3bQ8BHK2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn3bQ8BHK2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Scn3bQ8BHK2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Scn3bQ8BHK2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn3bQ8BHK2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn3bQ8BHK2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn3bQ8BHK2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn3bQ8BHK2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn3bQ8BHK2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms