Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Gm12008-201ENSMUST00000117791 755 ntBASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Atp13a4Q5XF90 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Gm18206-201ENSMUST00000207027 926 ntBASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp13a4Q5XF90 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atp13a4Q5XF90 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.21■□□□□ 0.18
Atp13a4Q5XF90 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atp13a4Q5XF90 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atp13a4Q5XF90 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atp13a4Q5XF90 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Gm17968-201ENSMUST00000194902 784 ntBASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Atp13a4Q5XF90 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Gm9727-201ENSMUST00000161387 555 ntBASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 Gm27525-201ENSMUST00000184465 107 ntBASIC16.19■□□□□ 0.18
Atp13a4Q5XF90 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms