Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav2Q5R1I9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav2Q5R1I9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav2Q5R1I9 Nrn1-204ENSMUST00000224323 1779 ntBASIC12□□□□□ -0.49
Trav2Q5R1I9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav2Q5R1I9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav2Q5R1I9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav2Q5R1I9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav2Q5R1I9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.98□□□□□ -0.49
Trav2Q5R1I9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav2Q5R1I9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav2Q5R1I9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms