Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6-2Q5R1I4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Gm12428-201ENSMUST00000119844 727 ntBASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Gm43767-201ENSMUST00000198933 381 ntBASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav6-2Q5R1I4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav6-2Q5R1I4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.14□□□□□ -0.31
Trav6-2Q5R1I4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Celf4-206ENSMUST00000224553 1729 ntBASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Gm13453-201ENSMUST00000118708 357 ntBASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Mir8102-201ENSMUST00000184148 139 ntBASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav6-2Q5R1I4 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms