Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Gm45167-201ENSMUST00000208007 322 ntBASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trdv4Q5R1A3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.4□□□□□ -0.43
Trdv4Q5R1A3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trdv4Q5R1A3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Gm13036-201ENSMUST00000117799 748 ntBASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Gm18195-201ENSMUST00000207604 706 ntBASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trdv4Q5R1A3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms