Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.5■□□□□ 0.23
Bbof1Q3V079 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.5■□□□□ 0.23
Bbof1Q3V079 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.5■□□□□ 0.23
Bbof1Q3V079 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Bbof1Q3V079 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.5■□□□□ 0.23
Bbof1Q3V079 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.5■□□□□ 0.23
Bbof1Q3V079 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Bbof1Q3V079 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.49■□□□□ 0.23
Bbof1Q3V079 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Bbof1Q3V079 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.48■□□□□ 0.23
Bbof1Q3V079 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Gm37153-201ENSMUST00000193637 231 ntBASIC16.48■□□□□ 0.23
Bbof1Q3V079 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Bbof1Q3V079 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.47■□□□□ 0.23
Bbof1Q3V079 Gm11764-201ENSMUST00000120221 623 ntBASIC16.47■□□□□ 0.23
Bbof1Q3V079 Gm12350-201ENSMUST00000121208 462 ntBASIC16.47■□□□□ 0.23
Bbof1Q3V079 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.47■□□□□ 0.23
Bbof1Q3V079 Gm15590-201ENSMUST00000078419 552 ntBASIC16.47■□□□□ 0.23
Bbof1Q3V079 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Bbof1Q3V079 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms