Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Fndc4Q3TR08 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.83□□□□□ -0.36
Fndc4Q3TR08 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fndc4Q3TR08 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Gm15165-201ENSMUST00000118140 502 ntBASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fndc4Q3TR08 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Gm12895-201ENSMUST00000122214 226 ntBASIC12.81□□□□□ -0.36
Fndc4Q3TR08 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fndc4Q3TR08 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms