Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Smn1P97801 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Smn1P97801 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smn1P97801 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smn1P97801 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smn1P97801 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smn1P97801 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.89□□□□□ -0.35
Smn1P97801 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smn1P97801 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.89□□□□□ -0.35
Smn1P97801 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.89□□□□□ -0.35
Smn1P97801 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Gm29518-201ENSMUST00000190858 372 ntBASIC12.89□□□□□ -0.35
Smn1P97801 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.89□□□□□ -0.35
Smn1P97801 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smn1P97801 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smn1P97801 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smn1P97801 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.89□□□□□ -0.35
Smn1P97801 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smn1P97801 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Carlr-201ENSMUST00000181515 2574 ntBASIC12.88□□□□□ -0.35
Smn1P97801 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Smn1P97801 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smn1P97801 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.88□□□□□ -0.35
Smn1P97801 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smn1P97801 Rprl3-201ENSMUST00000157400 290 ntBASIC12.88□□□□□ -0.35
Smn1P97801 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.88□□□□□ -0.35
Smn1P97801 Gm44454-201ENSMUST00000198541 138 ntBASIC12.88□□□□□ -0.35
Smn1P97801 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smn1P97801 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.88□□□□□ -0.35
Smn1P97801 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.88□□□□□ -0.35
Smn1P97801 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Smn1P97801 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smn1P97801 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smn1P97801 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smn1P97801 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.87□□□□□ -0.35
Smn1P97801 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.87□□□□□ -0.35
Smn1P97801 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Smn1P97801 Mir3081-201ENSMUST00000175305 84 ntBASIC12.87□□□□□ -0.35
Smn1P97801 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.87□□□□□ -0.35
Smn1P97801 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Smn1P97801 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.87□□□□□ -0.35
Smn1P97801 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.87□□□□□ -0.35
Smn1P97801 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Gm18622-201ENSMUST00000219361 595 ntBASIC12.87□□□□□ -0.35
Smn1P97801 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.87□□□□□ -0.35
Smn1P97801 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smn1P97801 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms