Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nphp4P59240 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nphp4P59240 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.18■□□□□ 0.82
Nphp4P59240 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC20.18■□□□□ 0.82
Nphp4P59240 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nphp4P59240 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Nphp4P59240 Gm15321-201ENSMUST00000121290 288 ntBASIC20.18■□□□□ 0.82
Nphp4P59240 AC156016.3-201ENSMUST00000228623 344 ntBASIC20.18■□□□□ 0.82
Nphp4P59240 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC20.18■□□□□ 0.82
Nphp4P59240 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nphp4P59240 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nphp4P59240 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nphp4P59240 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC20.17■□□□□ 0.82
Nphp4P59240 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nphp4P59240 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Mir1897-201ENSMUST00000122581 272 ntBASIC20.17■□□□□ 0.82
Nphp4P59240 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nphp4P59240 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Nphp4P59240 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC20.16■□□□□ 0.82
Nphp4P59240 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Nphp4P59240 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Gm4875-201ENSMUST00000118257 786 ntBASIC20.16■□□□□ 0.82
Nphp4P59240 Gm27838-201ENSMUST00000184829 128 ntBASIC20.16■□□□□ 0.82
Nphp4P59240 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.16■□□□□ 0.82
Nphp4P59240 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Syt7-204ENSMUST00000223586 1344 ntBASIC20.16■□□□□ 0.82
Nphp4P59240 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nphp4P59240 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.15■□□□□ 0.82
Nphp4P59240 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC20.15■□□□□ 0.82
Nphp4P59240 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.15■□□□□ 0.82
Nphp4P59240 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC20.15■□□□□ 0.82
Nphp4P59240 Gm10275-202ENSMUST00000168697 495 ntBASIC20.15■□□□□ 0.82
Nphp4P59240 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC20.15■□□□□ 0.82
Nphp4P59240 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC20.15■□□□□ 0.82
Nphp4P59240 Gm10275-201ENSMUST00000092620 635 ntBASIC20.15■□□□□ 0.82
Nphp4P59240 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nphp4P59240 BC001981-202ENSMUST00000191393 1545 ntBASIC20.15■□□□□ 0.82
Nphp4P59240 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nphp4P59240 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nphp4P59240 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nphp4P59240 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nphp4P59240 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nphp4P59240 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nphp4P59240 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nphp4P59240 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
Nphp4P59240 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC20.14■□□□□ 0.81
Nphp4P59240 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC20.14■□□□□ 0.81
Nphp4P59240 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC20.14■□□□□ 0.81
Nphp4P59240 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.14■□□□□ 0.81
Nphp4P59240 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nphp4P59240 Gm7730-201ENSMUST00000212486 454 ntBASIC20.14■□□□□ 0.81
Nphp4P59240 Gm46209-201ENSMUST00000217912 553 ntBASIC20.14■□□□□ 0.81
Nphp4P59240 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nphp4P59240 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nphp4P59240 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Nphp4P59240 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms