Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.88□□□□□ -0.51
Rab4aP56371 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Rab4aP56371 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rab4aP56371 Gm26571-201ENSMUST00000181399 666 ntBASIC11.88□□□□□ -0.51
Rab4aP56371 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.88□□□□□ -0.51
Rab4aP56371 Gm9731-201ENSMUST00000209480 747 ntBASIC11.88□□□□□ -0.51
Rab4aP56371 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rab4aP56371 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rab4aP56371 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Rab4aP56371 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.87□□□□□ -0.51
Rab4aP56371 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.87□□□□□ -0.51
Rab4aP56371 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Rab4aP56371 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rab4aP56371 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Rab4aP56371 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rab4aP56371 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Rab4aP56371 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.87□□□□□ -0.51
Rab4aP56371 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rab4aP56371 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Rab4aP56371 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.87□□□□□ -0.51
Rab4aP56371 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.87□□□□□ -0.51
Rab4aP56371 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rab4aP56371 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Rab4aP56371 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.86□□□□□ -0.51
Rab4aP56371 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rab4aP56371 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rab4aP56371 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Rab4aP56371 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rab4aP56371 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms