Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rrp1P56183 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Rrp1P56183 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Rrp1P56183 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.95■□□□□ 0.3
Rrp1P56183 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.95■□□□□ 0.3
Rrp1P56183 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.95■□□□□ 0.3
Rrp1P56183 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rrp1P56183 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.94■□□□□ 0.3
Rrp1P56183 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rrp1P56183 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rrp1P56183 Gm12895-201ENSMUST00000122214 226 ntBASIC16.94■□□□□ 0.3
Rrp1P56183 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.94■□□□□ 0.3
Rrp1P56183 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rrp1P56183 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rrp1P56183 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.94■□□□□ 0.3
Rrp1P56183 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.94■□□□□ 0.3
Rrp1P56183 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rrp1P56183 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rrp1P56183 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.93■□□□□ 0.3
Rrp1P56183 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.93■□□□□ 0.3
Rrp1P56183 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rrp1P56183 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.93■□□□□ 0.3
Rrp1P56183 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.93■□□□□ 0.3
Rrp1P56183 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rrp1P56183 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rrp1P56183 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rrp1P56183 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.92■□□□□ 0.3
Rrp1P56183 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rrp1P56183 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.92■□□□□ 0.3
Rrp1P56183 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rrp1P56183 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.92■□□□□ 0.3
Rrp1P56183 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rrp1P56183 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.92■□□□□ 0.3
Rrp1P56183 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rrp1P56183 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms