Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.47□□□□□ -0.41
Nkx2-1P50220 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Gm25016-201ENSMUST00000158399 131 ntBASIC12.47□□□□□ -0.41
Nkx2-1P50220 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.47□□□□□ -0.41
Nkx2-1P50220 Mir7071-201ENSMUST00000184847 69 ntBASIC12.47□□□□□ -0.41
Nkx2-1P50220 Gm5587-201ENSMUST00000206270 674 ntBASIC12.47□□□□□ -0.41
Nkx2-1P50220 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-1P50220 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Gm13836-201ENSMUST00000121159 501 ntBASIC12.46□□□□□ -0.41
Nkx2-1P50220 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nkx2-1P50220 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.46□□□□□ -0.42
Nkx2-1P50220 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nkx2-1P50220 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.46□□□□□ -0.42
Nkx2-1P50220 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.45□□□□□ -0.42
Nkx2-1P50220 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nkx2-1P50220 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms