Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Xcl1P47993 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC9.78□□□□□ -0.84
Xcl1P47993 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC9.78□□□□□ -0.84
Xcl1P47993 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC9.78□□□□□ -0.84
Xcl1P47993 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Xcl1P47993 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.78□□□□□ -0.84
Xcl1P47993 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Xcl1P47993 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Xcl1P47993 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC9.78□□□□□ -0.84
Xcl1P47993 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Xcl1P47993 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC9.77□□□□□ -0.84
Xcl1P47993 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Gm44645-201ENSMUST00000205492 1653 ntBASIC9.77□□□□□ -0.84
Xcl1P47993 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Xcl1P47993 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Xcl1P47993 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC9.77□□□□□ -0.85
Xcl1P47993 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Xcl1P47993 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Xcl1P47993 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
Xcl1P47993 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.76□□□□□ -0.85
Xcl1P47993 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.76□□□□□ -0.85
Xcl1P47993 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Xcl1P47993 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
Xcl1P47993 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Xcl1P47993 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Gm24841-201ENSMUST00000158676 357 ntBASIC9.76□□□□□ -0.85
Xcl1P47993 AC093043.1-201ENSMUST00000226700 898 ntBASIC9.76□□□□□ -0.85
Xcl1P47993 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC9.76□□□□□ -0.85
Xcl1P47993 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Xcl1P47993 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.76□□□□□ -0.85
Xcl1P47993 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Xcl1P47993 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms