Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.13■□□□□ 0.01
Fen1P39749 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm8825-201ENSMUST00000182565 998 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm4518-201ENSMUST00000182638 718 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Fen1P39749 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.13■□□□□ 0.01
Fen1P39749 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Fen1P39749 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.13■□□□□ 0.01
Fen1P39749 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Fen1P39749 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Fen1P39749 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Fen1P39749 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Fen1P39749 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fen1P39749 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.12■□□□□ 0.01
Fen1P39749 Gm9103-201ENSMUST00000119371 405 ntBASIC15.12■□□□□ 0.01
Fen1P39749 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.12■□□□□ 0.01
Fen1P39749 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.12■□□□□ 0.01
Fen1P39749 Gm27741-201ENSMUST00000185060 237 ntBASIC15.12■□□□□ 0.01
Fen1P39749 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.12■□□□□ 0.01
Fen1P39749 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Fen1P39749 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Fen1P39749 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.12■□□□□ 0.01
Fen1P39749 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Fen1P39749 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.11■□□□□ 0.01
Fen1P39749 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Fen1P39749 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.11■□□□□ 0.01
Fen1P39749 Gm5587-201ENSMUST00000206270 674 ntBASIC15.11■□□□□ 0.01
Fen1P39749 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.11■□□□□ 0.01
Fen1P39749 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Fen1P39749 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Fen1P39749 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
Fen1P39749 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Fen1P39749 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Fen1P39749 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Fen1P39749 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.1■□□□□ 0.01
Fen1P39749 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Fen1P39749 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.1■□□□□ 0.01
Fen1P39749 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms