Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cdx1P18111 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdx1P18111 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cdx1P18111 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Gm18115-201ENSMUST00000221209 621 ntBASIC12.15□□□□□ -0.46
Cdx1P18111 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdx1P18111 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdx1P18111 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdx1P18111 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdx1P18111 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.15□□□□□ -0.47
Cdx1P18111 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdx1P18111 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdx1P18111 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdx1P18111 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Cdx1P18111 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.14□□□□□ -0.47
Cdx1P18111 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.14□□□□□ -0.47
Cdx1P18111 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.14□□□□□ -0.47
Cdx1P18111 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdx1P18111 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.13□□□□□ -0.47
Cdx1P18111 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.13□□□□□ -0.47
Cdx1P18111 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdx1P18111 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Cdx1P18111 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.13□□□□□ -0.47
Cdx1P18111 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdx1P18111 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cdx1P18111 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdx1P18111 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms