Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga1P17095 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga1P17095 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmga1P17095 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hmga1P17095 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Hmga1P17095 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Hmga1P17095 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Hmga1P17095 Gm5479-201ENSMUST00000160578 435 ntBASIC15.29■□□□□ 0.04
Hmga1P17095 Gm27618-201ENSMUST00000183671 60 ntBASIC15.29■□□□□ 0.04
Hmga1P17095 Gm18049-201ENSMUST00000208909 581 ntBASIC15.29■□□□□ 0.04
Hmga1P17095 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.29■□□□□ 0.04
Hmga1P17095 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.29■□□□□ 0.04
Hmga1P17095 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmga1P17095 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmga1P17095 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hmga1P17095 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmga1P17095 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hmga1P17095 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmga1P17095 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmga1P17095 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Hmga1P17095 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.28■□□□□ 0.04
Hmga1P17095 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Gm13464-201ENSMUST00000119418 935 ntBASIC15.28■□□□□ 0.04
Hmga1P17095 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmga1P17095 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmga1P17095 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.28■□□□□ 0.04
Hmga1P17095 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmga1P17095 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Hmga1P17095 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmga1P17095 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmga1P17095 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Hmga1P17095 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmga1P17095 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmga1P17095 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmga1P17095 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.27■□□□□ 0.04
Hmga1P17095 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.27■□□□□ 0.04
Hmga1P17095 Gm27622-201ENSMUST00000183779 60 ntBASIC15.27■□□□□ 0.04
Hmga1P17095 Mir7023-201ENSMUST00000185093 64 ntBASIC15.27■□□□□ 0.04
Hmga1P17095 Gm18766-201ENSMUST00000189811 808 ntBASIC15.27■□□□□ 0.04
Hmga1P17095 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.27■□□□□ 0.04
Hmga1P17095 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hmga1P17095 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmga1P17095 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Hmga1P17095 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Hmga1P17095 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hmga1P17095 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms