Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TCRAP04437 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.68□□□□□ -0.22
TCRAP04437 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TCRAP04437 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.68□□□□□ -0.22
TCRAP04437 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.68□□□□□ -0.22
TCRAP04437 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TCRAP04437 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.68□□□□□ -0.22
TCRAP04437 AC073195.1-201ENST00000607241 877 ntBASIC13.68□□□□□ -0.22
TCRAP04437 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TCRAP04437 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TCRAP04437 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TCRAP04437 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.68□□□□□ -0.22
TCRAP04437 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRAP04437 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TCRAP04437 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TCRAP04437 AF186192.3-201ENST00000583427 947 ntBASIC13.67□□□□□ -0.22
TCRAP04437 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRAP04437 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.67□□□□□ -0.22
TCRAP04437 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.67□□□□□ -0.22
TCRAP04437 AL024508.2-201ENST00000607749 1894 ntBASIC13.67□□□□□ -0.22
TCRAP04437 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TCRAP04437 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TCRAP04437 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.67□□□□□ -0.22
TCRAP04437 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRAP04437 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRAP04437 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRAP04437 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.66□□□□□ -0.22
TCRAP04437 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TCRAP04437 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 AC100803.2-201ENST00000562459 1963 ntBASIC13.66□□□□□ -0.22
TCRAP04437 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRAP04437 KRT18P23-201ENST00000435622 1283 ntBASIC13.66□□□□□ -0.22
TCRAP04437 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 CA15P1-201ENST00000481698 905 ntBASIC13.66□□□□□ -0.22
TCRAP04437 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.66□□□□□ -0.22
TCRAP04437 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.66□□□□□ -0.22
TCRAP04437 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TCRAP04437 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TCRAP04437 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TCRAP04437 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TCRAP04437 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.65□□□□□ -0.22
TCRAP04437 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms