Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Krt1P04104 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.23□□□□□ -0.13
Krt1P04104 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Krt1P04104 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.22□□□□□ -0.13
Krt1P04104 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Krt1P04104 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.22□□□□□ -0.13
Krt1P04104 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Krt1P04104 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.22□□□□□ -0.13
Krt1P04104 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Krt1P04104 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Krt1P04104 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Krt1P04104 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Krt1P04104 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.21□□□□□ -0.13
Krt1P04104 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Krt1P04104 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Krt1P04104 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.21□□□□□ -0.13
Krt1P04104 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Gm26039-201ENSMUST00000158152 144 ntBASIC14.21□□□□□ -0.13
Krt1P04104 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Krt1P04104 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Krt1P04104 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.21□□□□□ -0.13
Krt1P04104 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Krt1P04104 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Krt1P04104 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Krt1P04104 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Krt1P04104 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.2□□□□□ -0.14
Krt1P04104 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Krt1P04104 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.2□□□□□ -0.14
Krt1P04104 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Gm2274-201ENSMUST00000184539 609 ntBASIC14.2□□□□□ -0.14
Krt1P04104 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.2□□□□□ -0.14
Krt1P04104 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.2□□□□□ -0.14
Krt1P04104 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Krt1P04104 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Krt1P04104 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Krt1P04104 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.19□□□□□ -0.14
Krt1P04104 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.19□□□□□ -0.14
Krt1P04104 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Krt1P04104 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Krt1P04104 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Krt1P04104 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Krt1P04104 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms