Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Col5a1O88207 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.39□□□□□ -0.27
Col5a1O88207 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col5a1O88207 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.39□□□□□ -0.27
Col5a1O88207 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.39□□□□□ -0.27
Col5a1O88207 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.39□□□□□ -0.27
Col5a1O88207 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.39□□□□□ -0.27
Col5a1O88207 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col5a1O88207 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col5a1O88207 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col5a1O88207 BC037039-201ENSMUST00000192003 2205 ntBASIC13.38□□□□□ -0.27
Col5a1O88207 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.38□□□□□ -0.27
Col5a1O88207 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.38□□□□□ -0.27
Col5a1O88207 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col5a1O88207 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Col5a1O88207 Gm6222-201ENSMUST00000120787 396 ntBASIC13.38□□□□□ -0.27
Col5a1O88207 Gm11918-201ENSMUST00000121660 179 ntBASIC13.38□□□□□ -0.27
Col5a1O88207 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Col5a1O88207 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col5a1O88207 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
Col5a1O88207 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.38□□□□□ -0.27
Col5a1O88207 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col5a1O88207 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col5a1O88207 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col5a1O88207 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.37□□□□□ -0.27
Col5a1O88207 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.37□□□□□ -0.27
Col5a1O88207 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.37□□□□□ -0.27
Col5a1O88207 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Gm18624-201ENSMUST00000220966 658 ntBASIC13.37□□□□□ -0.27
Col5a1O88207 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Col5a1O88207 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Gm15823-201ENSMUST00000064305 670 ntBASIC13.37□□□□□ -0.27
Col5a1O88207 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.37□□□□□ -0.27
Col5a1O88207 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col5a1O88207 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col5a1O88207 Gm5566-201ENSMUST00000116118 459 ntBASIC13.36□□□□□ -0.27
Col5a1O88207 Gm3436-201ENSMUST00000179930 840 ntBASIC13.36□□□□□ -0.27
Col5a1O88207 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.36□□□□□ -0.27
Col5a1O88207 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.36□□□□□ -0.27
Col5a1O88207 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.36□□□□□ -0.27
Col5a1O88207 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.36□□□□□ -0.27
Col5a1O88207 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col5a1O88207 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms