Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.22■□□□□ 0.67
Ubr1O70481 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19.22■□□□□ 0.67
Ubr1O70481 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ubr1O70481 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubr1O70481 Gm23984-201ENSMUST00000157139 203 ntBASIC19.21■□□□□ 0.67
Ubr1O70481 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.21■□□□□ 0.67
Ubr1O70481 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ubr1O70481 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Gm15678-201ENSMUST00000117573 960 ntBASIC19.21■□□□□ 0.67
Ubr1O70481 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ubr1O70481 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.21■□□□□ 0.67
Ubr1O70481 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ubr1O70481 BC037039-201ENSMUST00000192003 2205 ntBASIC19.21■□□□□ 0.67
Ubr1O70481 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ubr1O70481 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Ubr1O70481 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.2■□□□□ 0.66
Ubr1O70481 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr1O70481 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr1O70481 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr1O70481 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr1O70481 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC19.2■□□□□ 0.66
Ubr1O70481 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ubr1O70481 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr1O70481 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ubr1O70481 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.19■□□□□ 0.66
Ubr1O70481 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.19■□□□□ 0.66
Ubr1O70481 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ubr1O70481 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.19■□□□□ 0.66
Ubr1O70481 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ubr1O70481 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.19■□□□□ 0.66
Ubr1O70481 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ubr1O70481 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ubr1O70481 Gm33320-201ENSMUST00000192232 530 ntBASIC19.19■□□□□ 0.66
Ubr1O70481 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Gm9797-201ENSMUST00000052902 613 ntBASIC19.19■□□□□ 0.66
Ubr1O70481 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ubr1O70481 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ubr1O70481 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ubr1O70481 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
Ubr1O70481 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Ubr1O70481 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ubr1O70481 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.18■□□□□ 0.66
Ubr1O70481 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ubr1O70481 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ubr1O70481 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ubr1O70481 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ubr1O70481 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ubr1O70481 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ubr1O70481 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms