Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm5364-201ENSMUST00000216789 889 ntBASIC14.23□□□□□ -0.13
Rdh5O55240 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rdh5O55240 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rdh5O55240 Efs-202ENSMUST00000227037 2540 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.22□□□□□ -0.13
Rdh5O55240 Gm8000-201ENSMUST00000188378 592 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.22□□□□□ -0.13
Rdh5O55240 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rdh5O55240 Gm15590-201ENSMUST00000078419 552 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.22□□□□□ -0.13
Rdh5O55240 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.22□□□□□ -0.13
Rdh5O55240 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rdh5O55240 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.21□□□□□ -0.13
Rdh5O55240 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rdh5O55240 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.21□□□□□ -0.13
Rdh5O55240 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Gm37935-201ENSMUST00000192012 982 ntBASIC14.21□□□□□ -0.13
Rdh5O55240 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.21□□□□□ -0.13
Rdh5O55240 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rdh5O55240 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rdh5O55240 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.21□□□□□ -0.13
Rdh5O55240 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rdh5O55240 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rdh5O55240 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rdh5O55240 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rdh5O55240 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rdh5O55240 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rdh5O55240 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms