Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.44■□□□□ 0.22
Trdmt1O55055 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm15321-201ENSMUST00000121290 288 ntBASIC16.44■□□□□ 0.22
Trdmt1O55055 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.44■□□□□ 0.22
Trdmt1O55055 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trdmt1O55055 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trdmt1O55055 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trdmt1O55055 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.43■□□□□ 0.22
Trdmt1O55055 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trdmt1O55055 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trdmt1O55055 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trdmt1O55055 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm13464-201ENSMUST00000119418 935 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 Mir1897-201ENSMUST00000122581 272 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm24694-201ENSMUST00000180054 110 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm27663-201ENSMUST00000184839 110 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm45098-201ENSMUST00000207179 657 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.42■□□□□ 0.22
Trdmt1O55055 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.42■□□□□ 0.22
Trdmt1O55055 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trdmt1O55055 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
Trdmt1O55055 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trdmt1O55055 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms