Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm22175-201ENSMUST00000175007 78 ntBASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm27430-201ENSMUST00000184585 107 ntBASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm44333-201ENSMUST00000197168 107 ntBASIC12.67□□□□□ -0.38
Cxcl13O55038 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.67□□□□□ -0.38
Cxcl13O55038 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Cxcl13O55038 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cxcl13O55038 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Gm27920-201ENSMUST00000183953 96 ntBASIC12.66□□□□□ -0.38
Cxcl13O55038 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.66□□□□□ -0.38
Cxcl13O55038 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cxcl13O55038 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cxcl13O55038 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.65□□□□□ -0.38
Cxcl13O55038 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Gm5779-201ENSMUST00000218467 910 ntBASIC12.65□□□□□ -0.38
Cxcl13O55038 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl13O55038 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cxcl13O55038 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms