Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.08■□□□□ 0.16
Cpsf2O35218 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cpsf2O35218 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.08■□□□□ 0.16
Cpsf2O35218 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Cpsf2O35218 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.08■□□□□ 0.16
Cpsf2O35218 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cpsf2O35218 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.07■□□□□ 0.16
Cpsf2O35218 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.07■□□□□ 0.16
Cpsf2O35218 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cpsf2O35218 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Gm27646-201ENSMUST00000183989 110 ntBASIC16.07■□□□□ 0.16
Cpsf2O35218 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.07■□□□□ 0.16
Cpsf2O35218 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.07■□□□□ 0.16
Cpsf2O35218 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.07■□□□□ 0.16
Cpsf2O35218 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Cpsf2O35218 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.07■□□□□ 0.16
Cpsf2O35218 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cpsf2O35218 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cpsf2O35218 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.06■□□□□ 0.16
Cpsf2O35218 Gm6296-201ENSMUST00000222599 943 ntBASIC16.06■□□□□ 0.16
Cpsf2O35218 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.06■□□□□ 0.16
Cpsf2O35218 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf2O35218 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.05■□□□□ 0.16
Cpsf2O35218 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.05■□□□□ 0.16
Cpsf2O35218 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Gm18669-201ENSMUST00000216049 778 ntBASIC16.05■□□□□ 0.16
Cpsf2O35218 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf2O35218 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Cpsf2O35218 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms