Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col15a1O35206 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col15a1O35206 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col15a1O35206 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.07■□□□□ 0.64
Col15a1O35206 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col15a1O35206 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Col15a1O35206 Gm8515-201ENSMUST00000194852 576 ntBASIC19.07■□□□□ 0.64
Col15a1O35206 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col15a1O35206 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col15a1O35206 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col15a1O35206 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Col15a1O35206 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.06■□□□□ 0.64
Col15a1O35206 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm9229-201ENSMUST00000222777 126 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col15a1O35206 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Col15a1O35206 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm10766-202ENSMUST00000194123 606 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 Gm18018-201ENSMUST00000198273 408 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 Gm9908-201ENSMUST00000211534 448 ntBASIC19.06■□□□□ 0.64
Col15a1O35206 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.06■□□□□ 0.64
Col15a1O35206 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.05■□□□□ 0.64
Col15a1O35206 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Col15a1O35206 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Col15a1O35206 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col15a1O35206 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col15a1O35206 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col15a1O35206 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col15a1O35206 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Gm43433-201ENSMUST00000196573 481 ntBASIC19.04■□□□□ 0.64
Col15a1O35206 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms