Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx4O35137 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
Alx4O35137 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx4O35137 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Alx4O35137 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.4□□□□□ -0.26
Alx4O35137 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx4O35137 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Alx4O35137 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Alx4O35137 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.39□□□□□ -0.27
Alx4O35137 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.39□□□□□ -0.27
Alx4O35137 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.39□□□□□ -0.27
Alx4O35137 Gm23634-201ENSMUST00000175071 91 ntBASIC13.39□□□□□ -0.27
Alx4O35137 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.39□□□□□ -0.27
Alx4O35137 Gm27867-201ENSMUST00000184778 125 ntBASIC13.39□□□□□ -0.27
Alx4O35137 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.39□□□□□ -0.27
Alx4O35137 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.39□□□□□ -0.27
Alx4O35137 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Alx4O35137 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Alx4O35137 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Alx4O35137 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.39□□□□□ -0.27
Alx4O35137 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Alx4O35137 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Alx4O35137 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.38□□□□□ -0.27
Alx4O35137 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Alx4O35137 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Alx4O35137 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Alx4O35137 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Alx4O35137 AA414768-201ENSMUST00000121924 1257 ntBASIC13.38□□□□□ -0.27
Alx4O35137 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms