Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Efs-202ENSMUST00000227037 2540 ntBASIC15.37■□□□□ 0.05
Ercc2O08811 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ercc2O08811 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.36■□□□□ 0.05
Ercc2O08811 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ercc2O08811 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.36■□□□□ 0.05
Ercc2O08811 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Gm9727-201ENSMUST00000161387 555 ntBASIC15.36■□□□□ 0.05
Ercc2O08811 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.36■□□□□ 0.05
Ercc2O08811 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.36■□□□□ 0.05
Ercc2O08811 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.36■□□□□ 0.05
Ercc2O08811 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.36■□□□□ 0.05
Ercc2O08811 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Ercc2O08811 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ercc2O08811 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ercc2O08811 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ercc2O08811 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.35■□□□□ 0.05
Ercc2O08811 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ercc2O08811 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 AW822252-206ENSMUST00000208904 237 ntBASIC15.35■□□□□ 0.05
Ercc2O08811 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.35■□□□□ 0.05
Ercc2O08811 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ercc2O08811 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.35■□□□□ 0.05
Ercc2O08811 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ercc2O08811 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ercc2O08811 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.34■□□□□ 0.05
Ercc2O08811 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ercc2O08811 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.34■□□□□ 0.05
Ercc2O08811 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ercc2O08811 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ercc2O08811 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc2O08811 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc2O08811 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ercc2O08811 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms