Protein–RNA interactions for Protein: L7N2D2

Gm3278, Predicted gene 3278, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3278L7N2D2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3278L7N2D2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3278L7N2D2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Mir1247-201ENSMUST00000116706 82 ntBASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Gm13392-201ENSMUST00000117708 150 ntBASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm3278L7N2D2 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Mir1894-201ENSMUST00000122802 81 ntBASIC17.55■□□□□ 0.4
Gm3278L7N2D2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Gm33320-201ENSMUST00000192232 530 ntBASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Gm2451-201ENSMUST00000199447 999 ntBASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Gm10290-201ENSMUST00000200451 999 ntBASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3278L7N2D2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm13226-201ENSMUST00000117838 404 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm6244-201ENSMUST00000178732 841 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm27839-201ENSMUST00000184242 106 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm42693-201ENSMUST00000196779 631 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm6916-202ENSMUST00000205523 195 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gm10478-201ENSMUST00000084451 396 ntBASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3278L7N2D2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3278L7N2D2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3278L7N2D2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3278L7N2D2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3278L7N2D2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms