Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdh9F8VPK8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Pcdh9F8VPK8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm13418-201ENSMUST00000119097 944 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44357-201ENSMUST00000195897 142 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm19658-201ENSMUST00000196231 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44367-201ENSMUST00000196836 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44350-201ENSMUST00000197197 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44390-201ENSMUST00000197533 144 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44313-201ENSMUST00000198018 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44486-201ENSMUST00000198508 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44314-201ENSMUST00000199263 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44394-201ENSMUST00000199558 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44484-201ENSMUST00000199873 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44466-201ENSMUST00000200264 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm44359-201ENSMUST00000200671 138 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.39■□□□□ 0.05
Pcdh9F8VPK8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Carlr-201ENSMUST00000181515 2574 ntBASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh9F8VPK8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh9F8VPK8 Gm23547-201ENSMUST00000158210 271 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms