Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Gm12382-201ENSMUST00000122005 922 ntBASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-2D3Z4R4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Gm13158-201ENSMUST00000122007 736 ntBASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Gm18025-201ENSMUST00000221733 862 ntBASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-2D3Z4R4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Gm10517-202ENSMUST00000192970 758 ntBASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.21□□□□□ -0.45
Nkx6-2D3Z4R4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-2D3Z4R4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx6-2D3Z4R4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx6-2D3Z4R4 Dio3-201ENSMUST00000097228 1449 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms