Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Gm21009-201ENSMUST00000197169 1669 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Gm15483-201ENSMUST00000120338 456 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tmf1B9EKI3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tmf1B9EKI3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Gm18889-201ENSMUST00000174284 929 ntBASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tmf1B9EKI3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Gm44872-201ENSMUST00000207864 420 ntBASIC20.25■□□□□ 0.83
Tmf1B9EKI3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tmf1B9EKI3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.24■□□□□ 0.83
Tmf1B9EKI3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Gm13034-201ENSMUST00000121342 3177 ntBASIC20.24■□□□□ 0.83
Tmf1B9EKI3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms