Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm5640A3KG49 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm5640A3KG49 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.23■□□□□ 0.03
Gm5640A3KG49 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm13436-201ENSMUST00000120418 567 ntBASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm5640A3KG49 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.22■□□□□ 0.03
Gm5640A3KG49 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm5640A3KG49 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.22■□□□□ 0.03
Gm5640A3KG49 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms