Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm25925-201ENSMUST00000158314 306 ntBASIC15.68■□□□□ 0.1
Scn1aA2APX8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn1aA2APX8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Scn1aA2APX8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Gm18737-201ENSMUST00000173594 937 ntBASIC15.67■□□□□ 0.1
Scn1aA2APX8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.67■□□□□ 0.1
Scn1aA2APX8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Efs-202ENSMUST00000227037 2540 ntBASIC15.67■□□□□ 0.1
Scn1aA2APX8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Gm15693-201ENSMUST00000120470 637 ntBASIC15.67■□□□□ 0.1
Scn1aA2APX8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn1aA2APX8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.66■□□□□ 0.1
Scn1aA2APX8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn1aA2APX8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.65■□□□□ 0.1
Scn1aA2APX8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Gm7774-201ENSMUST00000200064 533 ntBASIC15.65■□□□□ 0.1
Scn1aA2APX8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Scn1aA2APX8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn1aA2APX8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn1aA2APX8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn1aA2APX8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms