Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-7A0A075B6B0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-7A0A075B6B0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm4535-201ENSMUST00000182274 558 ntBASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm10060-201ENSMUST00000212002 111 ntBASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm8655-201ENSMUST00000221159 852 ntBASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gm10355-201ENSMUST00000097146 517 ntBASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-7A0A075B6B0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav6d-7A0A075B6B0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms