Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Gm16061-201ENSMUST00000122167 857 ntBASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav7n-4A0A075B620 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav7n-4A0A075B620 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav7n-4A0A075B620 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms