Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav16d-dv11A0A075B617 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm12527-201ENSMUST00000117967 564 ntBASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm26039-201ENSMUST00000158152 144 ntBASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm2274-201ENSMUST00000184539 609 ntBASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav16d-dv11A0A075B617 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms