Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Gm2810-201ENSMUST00000118681 990 ntBASIC13.66□□□□□ -0.22
Prg4Q9JM99 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.66□□□□□ -0.22
Prg4Q9JM99 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Prg4Q9JM99 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.65□□□□□ -0.22
Prg4Q9JM99 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 BC037039-201ENSMUST00000192003 2205 ntBASIC13.65□□□□□ -0.22
Prg4Q9JM99 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Prg4Q9JM99 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
Prg4Q9JM99 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.64□□□□□ -0.23
Prg4Q9JM99 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.64□□□□□ -0.23
Prg4Q9JM99 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prg4Q9JM99 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.63□□□□□ -0.23
Prg4Q9JM99 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prg4Q9JM99 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms