Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rhox4bQ9JI43 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm6257-201ENSMUST00000163864 910 ntBASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rhox4bQ9JI43 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gm12527-201ENSMUST00000117967 564 ntBASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gm7370-201ENSMUST00000219471 767 ntBASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rhox4bQ9JI43 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rhox4bQ9JI43 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms