Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 WWOX-216ENST00000569818 525 ntBASIC18.73■□□□□ 0.59
DDX47Q9H0S4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX47Q9H0S4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 AC104390.1-201ENST00000555663 520 ntBASIC18.72■□□□□ 0.59
DDX47Q9H0S4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DDX47Q9H0S4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 LINC00304-203ENST00000565008 1864 ntBASIC18.71■□□□□ 0.59
DDX47Q9H0S4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 AC009065.1-201ENST00000564055 1225 ntBASIC18.71■□□□□ 0.59
DDX47Q9H0S4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 AL023803.3-201ENST00000615559 522 ntBASIC18.71■□□□□ 0.59
DDX47Q9H0S4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.71■□□□□ 0.59
DDX47Q9H0S4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
DDX47Q9H0S4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 CD99P1-205ENST00000527459 561 ntBASIC18.7■□□□□ 0.58
DDX47Q9H0S4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DDX47Q9H0S4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms