Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Dap3Q9ER88 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Gm23547-201ENSMUST00000158210 271 ntBASIC13.85□□□□□ -0.19
Dap3Q9ER88 Gm6345-202ENSMUST00000180900 204 ntBASIC13.85□□□□□ -0.19
Dap3Q9ER88 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.85□□□□□ -0.19
Dap3Q9ER88 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.85□□□□□ -0.19
Dap3Q9ER88 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Dap3Q9ER88 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.84□□□□□ -0.19
Dap3Q9ER88 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Gm17808-201ENSMUST00000200859 894 ntBASIC13.84□□□□□ -0.19
Dap3Q9ER88 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Dap3Q9ER88 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Dap3Q9ER88 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Dap3Q9ER88 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Dap3Q9ER88 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Dap3Q9ER88 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.83□□□□□ -0.2
Dap3Q9ER88 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Dap3Q9ER88 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.83□□□□□ -0.2
Dap3Q9ER88 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.83□□□□□ -0.2
Dap3Q9ER88 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Dap3Q9ER88 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Dap3Q9ER88 AA414768-201ENSMUST00000121924 1257 ntBASIC13.82□□□□□ -0.2
Dap3Q9ER88 Gm23634-201ENSMUST00000175071 91 ntBASIC13.82□□□□□ -0.2
Dap3Q9ER88 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.82□□□□□ -0.2
Dap3Q9ER88 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms