Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf13cQ9D8D0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf13cQ9D8D0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm6433-201ENSMUST00000118634 875 ntBASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm9987-201ENSMUST00000069768 567 ntBASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tnfrsf13cQ9D8D0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Mir6982-201ENSMUST00000184354 68 ntBASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm7367-201ENSMUST00000057611 492 ntBASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfrsf13cQ9D8D0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm15565-201ENSMUST00000118890 427 ntBASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.73□□□□□ -0.53
Tnfrsf13cQ9D8D0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms