Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gm25406-201ENSMUST00000157599 105 ntBASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Gm18101-201ENSMUST00000215769 548 ntBASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hdhd3Q9CYW4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Gm6623-201ENSMUST00000173570 544 ntBASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Carlr-201ENSMUST00000181515 2574 ntBASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Hdhd3Q9CYW4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms