Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gm5264-201ENSMUST00000190584 848 ntBASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sft2d3Q9CSV6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Gm11779-201ENSMUST00000118541 368 ntBASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Gm37153-201ENSMUST00000193637 231 ntBASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sft2d3Q9CSV6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sft2d3Q9CSV6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sft2d3Q9CSV6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Sft2d3Q9CSV6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sft2d3Q9CSV6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm15358-201ENSMUST00000119249 520 ntBASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm11594-201ENSMUST00000122313 162 ntBASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sft2d3Q9CSV6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms