Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Gm7669-201ENSMUST00000210184 1603 ntBASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Gm13332-201ENSMUST00000120451 1398 ntBASIC8.1□□□□□ -1.11
Sec61bQ9CQS8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm11745-201ENSMUST00000121669 448 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 AA543401-201ENSMUST00000164248 1269 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm10499-201ENSMUST00000174094 934 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm18889-201ENSMUST00000174284 929 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm10253-201ENSMUST00000194270 940 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm7774-201ENSMUST00000200064 533 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm7556-201ENSMUST00000201178 1084 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm43125-201ENSMUST00000201724 730 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm18057-201ENSMUST00000208220 503 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gm43598-201ENSMUST00000202482 2479 ntBASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Sec61bQ9CQS8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.12
Sec61bQ9CQS8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Sec61bQ9CQS8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms