Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.23□□□□□ -0.13
Ska1Q9CPV1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ska1Q9CPV1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Gm15165-201ENSMUST00000118140 502 ntBASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ska1Q9CPV1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ska1Q9CPV1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.21□□□□□ -0.14
Ska1Q9CPV1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.2□□□□□ -0.14
Ska1Q9CPV1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms