Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-1Q99MA9 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.08□□□□□ -0.15
Nkx6-1Q99MA9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-1Q99MA9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-1Q99MA9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-1Q99MA9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx6-1Q99MA9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Gm27533-201ENSMUST00000183800 152 ntBASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Gm6218-201ENSMUST00000219812 628 ntBASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx6-1Q99MA9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Gm27680-201ENSMUST00000184192 160 ntBASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Gm25857-201ENSMUST00000082788 129 ntBASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-1Q99MA9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Gm28631-201ENSMUST00000190740 334 ntBASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Gm6745-201ENSMUST00000199216 526 ntBASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-1Q99MA9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Gm23984-201ENSMUST00000157139 203 ntBASIC14.05□□□□□ -0.16
Nkx6-1Q99MA9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms