Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Smtnl1Q99LM3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Smtnl1Q99LM3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smtnl1Q99LM3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smtnl1Q99LM3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smtnl1Q99LM3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smtnl1Q99LM3 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.45■□□□□ 0.22
Smtnl1Q99LM3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms