Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.98■□□□□ 0.15
TraipQ8VIG6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TraipQ8VIG6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.97■□□□□ 0.15
TraipQ8VIG6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TraipQ8VIG6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.96■□□□□ 0.15
TraipQ8VIG6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Gm18049-201ENSMUST00000208909 581 ntBASIC15.96■□□□□ 0.15
TraipQ8VIG6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.96■□□□□ 0.15
TraipQ8VIG6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TraipQ8VIG6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TraipQ8VIG6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.95■□□□□ 0.14
TraipQ8VIG6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.95■□□□□ 0.14
TraipQ8VIG6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.95■□□□□ 0.14
TraipQ8VIG6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms