Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.57■□□□□ 0.08
Trim60Q8VI40 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim60Q8VI40 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.56■□□□□ 0.08
Trim60Q8VI40 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.56■□□□□ 0.08
Trim60Q8VI40 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.56■□□□□ 0.08
Trim60Q8VI40 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.56■□□□□ 0.08
Trim60Q8VI40 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim60Q8VI40 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.55■□□□□ 0.08
Trim60Q8VI40 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.55■□□□□ 0.08
Trim60Q8VI40 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.55■□□□□ 0.08
Trim60Q8VI40 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim60Q8VI40 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim60Q8VI40 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim60Q8VI40 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms