Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Slf1Q8R3P9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.24■□□□□ 0.03
Slf1Q8R3P9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slf1Q8R3P9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Gm23634-201ENSMUST00000175071 91 ntBASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slf1Q8R3P9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.22■□□□□ 0.03
Slf1Q8R3P9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms